Genboree Discovery System 

Genboree Discovery System is a turnkey software system for genomic research. While it can be configured to support almost any genome-centric discovery process, a number of configurations already exist for specific applications. Current focus is on enabling studies of genome variation, including array CGH studies, resequencing using Sanger method and PCR and using next-generation sequencing technologies, comparative sequence assembly, genome remapping using paired-end tags, genome analysis and annotation, multi-genome comparison and integration of data generated by multiple genomic technologies including gene expression, epigenomics, and array CGH. Genboree database and visualization settings, tools, and user roles are configurable to fit the needs of specific discovery processes. Private permanent project-specific databases can be accessed in a controlled way by collaborators via the Internet. Project-specific data is integrated with relevant data from public sources such as genome browsers and genomic databases. Data processing tools are integrated using a plug-in model. Genboree is extensible via flexible data-exchange formats to accommodate project specific tools and processing steps. Genboree Discovery System licenses for non-commercial use are available free of charge. The software can be customized as needed to fit your specific requirements. For more information about non-commercial and commercial licenses contact us by clicking here.

 Pash program 

Pash program implements Positional Hashing, an extremely fast and accurate sequence comparison method. Pash enables fast and sensitive detection of orthologous regions across mammalian genomes, and fast anchoring of hundreds of millions of short sequences produced by next-generation sequencing technologies. Pash program is configurable to serve various discovery pipelines and integrates into Genboree. Pash licenses for non-commercial use are available free of charge. The software can be customized as needed to fit your specific requirements. For more information about non-commercial and commercial licenses contact us by clicking here.